[ 875BIMLGAFK16 ] KV Genome Assembly

Workload Education level Study areas Responsible person Hours per week Coordinating university
3 ECTS M2 - Master's programme 2. year (*)Bioinformatik Sepp Hochreiter 2 hpw Johannes Kepler University Linz
Detailed information
Original study plan Master's programme Bioinformatics 2016W
Subject Introduction, Quality control and preprocessing of reads, De Novo genome assembly using DeBruijn graphs, De novo genome assembly using the OLC or String graph approach, Genome assembly using a reference genome, Transcriptome analysis (RNA-seq, RNA editing) de novo and with reference, Detecting Sequence Variants
Criteria for evaluation The final grade is based on a combined assessment of homework and a final exam.
Language English
Changing subject? No
On-site course
Maximum number of participants 35
Assignment procedure Direct assignment