[ 875BIN1SAPU12 ] UE Sequence Analysis and Phylogenetics

Es ist eine neuere Version 2015W dieser LV im Curriculum Bachelor's programme Computer Science 2014S vorhanden.
Workload Education level Study areas Responsible person Hours per week Coordinating university
3 ECTS M1 - Master's programme 1. year Computer Science G√ľnter Klambauer 2 hpw Johannes Kepler University Linz
Detailed information
Original study plan Master's programme Bioinformatics 2013W
Objectives This practical course complements the lecture "Sequence Analysis and Phylogenetics" and aims at practicing the concepts and methods acquired in the lecture.
  • Simple sequence comparisons and scoring schemes
  • Pairwise sequence alignment
  • Statistical analysis of sequence alignments
  • Multiple sequence alignment
  • Methods for computing evolutionary distance
  • Methods for computing phylogenetic trees
Criteria for evaluation Marking is based on homework
Methods Students are given assignments in 1-2 week intervals. Homework must be handed in. Results are to be presented and discussed in the course.
Language English
Study material Assignments and homework submissions are managed via JKU Moodle. Where necessary, complimentary course material is provided for download.
Changing subject? No
Corresponding lecture in collaboration with 875BIN1ASPV12: VL Sequence Analysis and Phylogenetics (3 ECTS)
equivalent to

BIMPFKVBIN1: KV Bioinformatik I: Sequenzanalyse und Phylogenie (6 ECTS)
On-site course
Maximum number of participants 35
Assignment procedure Direct assignment