Inhalt

[ 875BIN1SAPU12 ] UE (*)Sequence Analysis and Phylogenetics

Versionsauswahl
Es ist eine neuere Version 2015W dieser LV im Curriculum Bachelor's programme Computer Science 2014S vorhanden.
(*) Unfortunately this information is not available in english.
Workload Education level Study areas Responsible person Hours per week Coordinating university
3 ECTS M1 - Master's programme 1. year Computer Science Sepp Hochreiter 2 hpw Johannes Kepler University Linz
Detailed information
Original study plan Master's programme Bioinformatics 2012W
Objectives (*)This practical course complements the lecture "Sequence Analysis and Phylogenetics" and aims at practicing the concepts and methods acquired in the lecture.
Subject (*)
  • Simple sequence comparisons and scoring schemes
  • Pairwise sequence alignment
  • Statistical analysis of sequence alignments
  • Multiple sequence alignment
  • Methods for computing evolutionary distance
  • Methods for computing phylogenetic trees
Criteria for evaluation (*)Marking is based on homework
Methods (*)Students are given assignments in 1-2 week intervals. Homework must be handed in. Results are to be presented and discussed in the course.
Language English
Study material (*)Assignments and homework submissions are managed via JKU Moodle. Where necessary, complimentary course material is provided for download.
Changing subject? No
Corresponding lecture (*)in collaboration with 875BIN1ASPV12: VL Sequence Analysis and Phylogenetics (3 ECTS)
equivalent to

BIMPFKVBIN1: KV Bioinformatik I: Sequenzanalyse und Phylogenie (6 ECTS)
On-site course
Maximum number of participants 35
Assignment procedure Direct assignment