[ 663INFOSAPU22 ] UE Sequence Analysis and Phylogenetics

Workload Education level Study areas Responsible person Hours per week Coordinating university
3 ECTS B3 - Bachelor's programme 3. year (*)Biologische Chemie G√ľnter Klambauer 2 hpw Johannes Kepler University Linz
Detailed information
Original study plan Bachelor's programme Biological Chemistry 2021W
Objectives This practical course complements the lecture "Sequence Analysis and Phylogenetics" and aims at practicing the concepts and methods acquired in the lecture.
  • Simple sequence comparisons and scoring schemes
  • Pairwise sequence alignment
  • Statistical analysis of sequence alignments
  • Multiple sequence alignment
  • Methods for computing evolutionary distance
  • Methods for computing phylogenetic trees
Criteria for evaluation Marking is based on homework
Methods Students are given assignments in 1-2 week intervals. Homework must be handed in. Results are to be presented and discussed in the course.
Language English
Study material Assignments and homework submissions are managed via JKU Moodle. Where necessary, complimentary course material is provided for download.
Changing subject? No
Further information Until term 2022S known as: 675GTSBSAPU16 UE Sequence Analysis and Phylogenetics
until term 2016S known as: 875BIN1SAPU12 UE Sequence Analysis and Phylogenetics
Corresponding lecture 663INFOBBMU18: UE Exercises in Bioinformatics for Biological Chemistry & Molecular Biology (3 ECTS)
Earlier variants They also cover the requirements of the curriculum (from - to)
675GTSBSAPU16: UE Sequence Analysis and Phylogenetics (2016W-2022S)
875BIN1SAPU12: UE Sequence Analysis and Phylogenetics (2012W-2016S)
On-site course
Maximum number of participants 35
Assignment procedure Direct assignment